Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c16/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Skin for cell cluster c16
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c16
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c16_mean_counts_contribs float

liu2026Multiomics_Skin_c16_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Skin_c16_mean_counts_contribs [-0.0447, 0.0972]
n
114,457,771
mean
9.08e-05
sd
0.00273

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1144577713.57% 113254822
chr1 10508519 4.22% 10398541
chr2 9483121 3.92% 9382678
chr3 7364291 3.71% 7285119
chr4 5582834 2.94% 5521198
chr5 6604257 3.64% 6534285
chr6 6903217 4.04% 6830502
chr7 5983261 3.75% 5919483
chr8 5308961 3.66% 5252228
chr9 4941280 3.57% 4890222
chr10 5666876 4.24% 5607494
chr11 6063812 4.49% 6000806
chr12 5641588 4.23% 5582589
chr13 2965817 2.59% 2933934
chr14 3566665 3.33% 3528770
chr15 3581594 3.51% 3543771
chr16 3747981 4.15% 3709697
chr17 4772510 5.73% 4723632
chr18 2438648 3.03% 2411532
chr19 4295693 7.33% 4254741
chr20 2984823 4.63% 2954247
chr21 1380084 2.95% 1365724
chr22 1976441 3.89% 1956540
chrX 2695498 1.73% 2667089
432 contigs with no values (178243688 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 113254822 1 975 1.01 1
global segment-length histogram

Files

Filename Size md5
Skin_c16__mean_counts_contribs.bw 703.41 MB 055a77e4ca6a88ee45fa443c61a644d6
genomic_resource.yaml 1.31 KB cba2cdbc60d4c98ef7cdb2fe22c47066
statistics/