Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c16/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Skin for cell cluster c16
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c16
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c16_mean_pred_corrected float

liu2026Multiomics_Skin_c16_mean_pred_corrected
bias-corrected accessibility predicted by ChromBPNet
 HISTOGRAM FOR liu2026Multiomics_Skin_c16_mean_pred_corrected [0.000451, 2.89]
n
56,769,648
mean
0.0327
sd
0.0593

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 567696481.77% 56769617
chr1 5221010 2.10% 5221006
chr2 4690364 1.94% 4690361
chr3 3644204 1.84% 3644204
chr4 2752595 1.45% 2752593
chr5 3262489 1.80% 3262488
chr6 3435468 2.01% 3435468
chr7 2960558 1.86% 2960558
chr8 2622090 1.81% 2622089
chr9 2447644 1.77% 2447644
chr10 2801544 2.09% 2801541
chr11 3011396 2.23% 3011394
chr12 2802899 2.10% 2802899
chr13 1453261 1.27% 1453259
chr14 1771029 1.65% 1771028
chr15 1774040 1.74% 1774038
chr16 1860122 2.06% 1860122
chr17 2395508 2.88% 2395505
chr18 1199987 1.49% 1199986
chr19 2187991 3.73% 2187987
chr20 1476332 2.29% 1476332
chr21 681746 1.46% 681746
chr22 979003 1.93% 979002
chrX 1338368 0.86% 1338367
432 contigs with no values (178243688 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 56769617 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Skin_c16__mean_pred_corrected.bw 431.11 MB b62913a1b11530833fa88b45cb1a7ef0
genomic_resource.yaml 1.27 KB 64f1d11899d390e2c1c320db2bde180b
statistics/