Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c17/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Skin for cell cluster c17
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c17
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c17_mean_pred_corrected float

liu2026Multiomics_Skin_c17_mean_pred_corrected
bias-corrected accessibility predicted by ChromBPNet
 HISTOGRAM FOR liu2026Multiomics_Skin_c17_mean_pred_corrected [0.000498, 2.39]
n
71,412,497
mean
0.0278
sd
0.0449

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 714124972.23% 71412479
chr1 6853837 2.75% 6853833
chr2 6010372 2.48% 6010371
chr3 4797256 2.42% 4797256
chr4 3610628 1.90% 3610626
chr5 3940017 2.17% 3940017
chr6 4383517 2.57% 4383516
chr7 3628888 2.28% 3628886
chr8 3238867 2.23% 3238865
chr9 3104655 2.24% 3104654
chr10 3524237 2.63% 3524237
chr11 3720914 2.75% 3720914
chr12 3412856 2.56% 3412855
chr13 1821993 1.59% 1821993
chr14 2220345 2.07% 2220345
chr15 2316872 2.27% 2316872
chr16 2187925 2.42% 2187923
chr17 2860057 3.44% 2860057
chr18 1600023 1.99% 1600023
chr19 2644514 4.51% 2644514
chr20 1765398 2.74% 1765397
chr21 859814 1.84% 859814
chr22 1256145 2.47% 1256144
chrX 1653367 1.06% 1653367
432 contigs with no values (178243688 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 71412479 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Skin_c17__mean_pred_corrected.bw 541.88 MB 6677b9278a91c317328948090c846e3c
genomic_resource.yaml 1.27 KB 00a6b7e10c7a565ccae4e3d7ad368b45
statistics/