Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c18/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Skin for cell cluster c18 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Skin_c18_mean_counts_contribs | float |
liu2026Multiomics_Skin_c18_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0264, 0.0823] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 117786380 | 3.67% | 116463235 |
| chr1 | 11108422 | 4.46% | 10983986 |
| chr2 | 9727638 | 4.02% | 9616439 |
| chr3 | 7711347 | 3.89% | 7623055 |
| chr4 | 5888696 | 3.10% | 5819615 |
| chr5 | 6586215 | 3.63% | 6510409 |
| chr6 | 7295132 | 4.27% | 7212019 |
| chr7 | 6245011 | 3.92% | 6173930 |
| chr8 | 5275122 | 3.63% | 5214943 |
| chr9 | 4890470 | 3.53% | 4836253 |
| chr10 | 5793023 | 4.33% | 5728146 |
| chr11 | 5910304 | 4.38% | 5844935 |
| chr12 | 5889659 | 4.42% | 5823285 |
| chr13 | 2976768 | 2.60% | 2942083 |
| chr14 | 3636390 | 3.40% | 3595917 |
| chr15 | 3699519 | 3.63% | 3658535 |
| chr16 | 3824018 | 4.23% | 3783074 |
| chr17 | 4817988 | 5.79% | 4766169 |
| chr18 | 2543427 | 3.16% | 2514441 |
| chr19 | 4464531 | 7.62% | 4420325 |
| chr20 | 3165171 | 4.91% | 3130436 |
| chr21 | 1311384 | 2.81% | 1296639 |
| chr22 | 2001565 | 3.94% | 1980305 |
| chrX | 3018238 | 1.93% | 2984103 |
| chrY | 6342 | 0.01% | 4193 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 116463235 | 1 | 2114 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Skin_c18__mean_counts_contribs.bw | 722.35 MB | 06fe0b28bcafb7aa05524e0b04779e00 |
| genomic_resource.yaml | 1.31 KB | d875f1a2806d8e5278f4f38c6baf4dd5 |
| statistics/ |
