Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c18/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Skin for cell cluster c18
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c18
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c18_mean_pred_corrected float

liu2026Multiomics_Skin_c18_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Skin_c18_mean_pred_corrected [0.000249, 2.92]
n
58,287,861
mean
0.0304
sd
0.0521

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 582878611.82% 58286893
chr1 5506860 2.21% 5506857
chr2 4797922 1.98% 4797919
chr3 3823069 1.93% 3823068
chr4 2900280 1.52% 2900279
chr5 3243418 1.79% 3243416
chr6 3612158 2.11% 3612157
chr7 3074258 1.93% 3074257
chr8 2604441 1.79% 2604438
chr9 2419116 1.75% 2419114
chr10 2857320 2.14% 2857317
chr11 2929139 2.17% 2929137
chr12 2930475 2.20% 2930475
chr13 1458138 1.27% 1458137
chr14 1800759 1.68% 1800759
chr15 1829707 1.79% 1829706
chr16 1897151 2.10% 1897150
chr17 2397003 2.88% 2397003
chr18 1251980 1.56% 1251979
chr19 2263715 3.86% 2263715
chr20 1564418 2.43% 1564416
chr21 646861 1.38% 646861
chr22 981539 1.93% 981539
chrX 1495134 0.96% 1495133
chrY 3000 0.01% 2061
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 58286893 1 910 1 1
global segment-length histogram

Files

Filename Size md5
Skin_c18__mean_pred_corrected.bw 442.15 MB 26e46903630f2eca9d721d2c6c245523
genomic_resource.yaml 1.27 KB 142b02dfa35f05b1bf8e79dbf546497a
statistics/