Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c2/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Skin for cell cluster c2
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c2
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c2_mean_counts_contribs float

liu2026Multiomics_Skin_c2_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Skin_c2_mean_counts_contribs [-0.0839, 0.277]
n
291,350,423
mean
0.000292
sd
0.00405

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2913504239.08% 289490792
chr1 26630434 10.70% 26462369
chr2 24659052 10.18% 24500882
chr3 19455763 9.81% 19328558
chr4 14318388 7.53% 14220481
chr5 16890556 9.30% 16781814
chr6 18132814 10.62% 18015746
chr7 14976823 9.40% 14880044
chr8 13648383 9.40% 13560618
chr9 12981080 9.38% 12897651
chr10 14442684 10.79% 14349535
chr11 15284495 11.31% 15189425
chr12 14139413 10.61% 14049206
chr13 7881441 6.89% 7829320
chr14 9141018 8.54% 9083561
chr15 9285244 9.10% 9226625
chr16 9150760 10.13% 9094291
chr17 11665268 14.01% 11594896
chr18 6525854 8.12% 6482267
chr19 8820828 15.05% 8769907
chr20 7634443 11.85% 7587242
chr21 3543415 7.59% 3519801
chr22 5475732 10.78% 5442939
chrX 6666535 4.27% 6623614
432 contigs with no values (178243688 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 289490792 1 990 1.01 1
global segment-length histogram

Files

Filename Size md5
Skin_c2__mean_counts_contribs.bw 1.75 GB 5eeafbe17c5f32648415490991609924
genomic_resource.yaml 1.3 KB 2ab17a2aefb2bd2b913b65510dad88fd
statistics/