Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c2/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Skin for cell cluster c2
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c2
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c2_mean_pred_corrected float

liu2026Multiomics_Skin_c2_mean_pred_corrected
bias-corrected accessibility predicted by ChromBPNet
 HISTOGRAM FOR liu2026Multiomics_Skin_c2_mean_pred_corrected [0.00302, 70.8]
n
156,567,039
mean
0.334
sd
0.855

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1565670394.88% 156566910
chr1 14395298 5.78% 14395287
chr2 13212983 5.46% 13212975
chr3 10357197 5.22% 10357194
chr4 7568846 3.98% 7568838
chr5 9020094 4.97% 9020087
chr6 9727884 5.70% 9727879
chr7 8008518 5.03% 8008513
chr8 7287462 5.02% 7287453
chr9 6999002 5.06% 6998994
chr10 7737692 5.78% 7737686
chr11 8279201 6.13% 8279196
chr12 7625402 5.72% 7625395
chr13 4192055 3.67% 4192053
chr14 4921893 4.60% 4921888
chr15 4991150 4.89% 4991147
chr16 4937337 5.47% 4937331
chr17 6406797 7.70% 6406795
chr18 3487107 4.34% 3487101
chr19 4898789 8.36% 4898783
chr20 4095902 6.36% 4095895
chr21 1903249 4.07% 1903248
chr22 2958377 5.82% 2958370
chrX 3554804 2.28% 3554802
432 contigs with no values (178243688 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 156566910 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Skin_c2__mean_pred_corrected.bw 1.16 GB 753a1be2500afcb242006e33187644f8
genomic_resource.yaml 1.27 KB e4882151f1187f9a51a35ecb53991c3c
statistics/