Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c3/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Skin for cell cluster c3
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c3
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c3_mean_pred_corrected float

liu2026Multiomics_Skin_c3_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Skin_c3_mean_pred_corrected [0.000406, 51]
n
135,740,836
mean
0.295
sd
0.714

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1357408364.23% 135740735
chr1 12134812 4.87% 12134795
chr2 11565940 4.78% 11565932
chr3 9145767 4.61% 9145752
chr4 6951713 3.65% 6951703
chr5 8244798 4.54% 8244794
chr6 8398372 4.92% 8398366
chr7 7049940 4.42% 7049938
chr8 6476674 4.46% 6476671
chr9 6000420 4.34% 6000412
chr10 7064972 5.28% 7064965
chr11 6745377 4.99% 6745374
chr12 6484302 4.87% 6484301
chr13 3826065 3.35% 3826064
chr14 4291056 4.01% 4291055
chr15 4338215 4.25% 4338215
chr16 4025559 4.46% 4025558
chr17 5214398 6.26% 5214396
chr18 3115354 3.88% 3115353
chr19 3842205 6.55% 3842203
chr20 3590120 5.57% 3590116
chr21 1660104 3.55% 1660104
chr22 2142471 4.22% 2142469
chrX 3431202 2.20% 3431199
chrY 1000 <0.01% 1000
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 135740735 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Skin_c3__mean_pred_corrected.bw 1.0 GB 5b6c46dd360e98dcbf8899166f18d6b6
genomic_resource.yaml 1.27 KB e675a4b40731195a2e6dc51501d12966
statistics/