Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c4/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Skin for cell cluster c4
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c4
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c4_mean_pred_corrected float

liu2026Multiomics_Skin_c4_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Skin_c4_mean_pred_corrected [0.00148, 44.2]
n
143,273,637
mean
0.281
sd
0.695

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1432736374.46% 143273504
chr1 13067272 5.25% 13067258
chr2 12064889 4.98% 12064879
chr3 9583660 4.83% 9583647
chr4 7381255 3.88% 7381249
chr5 8524159 4.70% 8524152
chr6 8865245 5.19% 8865240
chr7 7442339 4.67% 7442331
chr8 6792270 4.68% 6792262
chr9 6210876 4.49% 6210871
chr10 7197538 5.38% 7197530
chr11 7193352 5.32% 7193345
chr12 6985482 5.24% 6985476
chr13 3974326 3.48% 3974321
chr14 4390313 4.10% 4390310
chr15 4561383 4.47% 4561381
chr16 4297562 4.76% 4297560
chr17 5732948 6.89% 5732942
chr18 3339897 4.16% 3339896
chr19 4243876 7.24% 4243870
chr20 3788441 5.88% 3788440
chr21 1699962 3.64% 1699961
chr22 2394785 4.71% 2394781
chrX 3540807 2.27% 3540802
chrY 1000 <0.01% 1000
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 143273504 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Skin_c4__mean_pred_corrected.bw 1.06 GB b365b91c5b5baa1d12e37a7f285faadc
genomic_resource.yaml 1.27 KB 59dcd3784d2098a850f4f6f6b4fcf55c
statistics/