Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c5/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Skin for cell cluster c5
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c5
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c5_mean_counts_contribs float

liu2026Multiomics_Skin_c5_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Skin_c5_mean_counts_contribs [-0.117, 0.183]
n
233,803,380
mean
0.000356
sd
0.00414

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2338033807.29% 232270861
chr1 20985353 8.43% 20847383
chr2 19867052 8.20% 19736198
chr3 15852433 7.99% 15748493
chr4 12247853 6.44% 12164190
chr5 14145544 7.79% 14052430
chr6 14628775 8.56% 14533547
chr7 12109834 7.60% 12029897
chr8 11241462 7.75% 11167068
chr9 10305416 7.45% 10237819
chr10 11988229 8.96% 11909972
chr11 11733412 8.69% 11657788
chr12 11263140 8.45% 11189689
chr13 6661867 5.83% 6617395
chr14 7392332 6.91% 7344149
chr15 7278499 7.14% 7231064
chr16 6758258 7.48% 6714555
chr17 8872531 10.66% 8815013
chr18 5368213 6.68% 5331866
chr19 6690863 11.41% 6649470
chr20 5991059 9.30% 5952363
chr21 2754944 5.90% 2736760
chr22 3620453 7.12% 3597519
chrX 6043744 3.87% 6004131
chrY 2114 <0.01% 2102
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 232270861 1 938 1.01 1
global segment-length histogram

Files

Filename Size md5
Skin_c5__mean_counts_contribs.bw 1.41 GB f2429a51a864707eb19f1a3ae8a674a3
genomic_resource.yaml 1.3 KB c3fde0d22fefb12c27de672547ad4f40
statistics/