Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c6/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Skin for cell cluster c6
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c6
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c6_mean_counts_contribs float

liu2026Multiomics_Skin_c6_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Skin_c6_mean_counts_contribs [-0.114, 0.18]
n
211,585,449
mean
0.000368
sd
0.00406

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2115854496.59% 210150587
chr1 19259066 7.74% 19127751
chr2 18153885 7.50% 18030686
chr3 13976351 7.05% 13879710
chr4 10560994 5.55% 10486541
chr5 12729785 7.01% 12642589
chr6 12983023 7.60% 12894743
chr7 10837822 6.80% 10763689
chr8 10099900 6.96% 10030606
chr9 9218484 6.66% 9156244
chr10 10952744 8.19% 10878106
chr11 10879935 8.05% 10807787
chr12 10226607 7.67% 10157454
chr13 5753838 5.03% 5713547
chr14 6543082 6.11% 6498952
chr15 6792534 6.66% 6747089
chr16 6459394 7.15% 6416855
chr17 8455100 10.16% 8400150
chr18 4763506 5.93% 4730033
chr19 6419197 10.95% 6379211
chr20 5511980 8.55% 5474726
chr21 2372705 5.08% 2356813
chr22 3476126 6.84% 3453371
chrX 5159391 3.31% 5123934
432 contigs with no values (178243688 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 210150587 1 947 1.01 1
global segment-length histogram

Files

Filename Size md5
Skin_c6__mean_counts_contribs.bw 1.27 GB d84d06051aa0028b6a6fd0d3ed9be66b
genomic_resource.yaml 1.3 KB e47928034d6488532eab52252018457d
statistics/