Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c6/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Skin for cell cluster c6
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c6
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c6_mean_pred_corrected float

liu2026Multiomics_Skin_c6_mean_pred_corrected
bias-corrected accessibility predicted by ChromBPNet
 HISTOGRAM FOR liu2026Multiomics_Skin_c6_mean_pred_corrected [0.00354, 25.5]
n
111,740,317
mean
0.2
sd
0.451

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1117403173.48% 111740262
chr1 10214908 4.10% 10214904
chr2 9555356 3.95% 9555349
chr3 7336059 3.70% 7336056
chr4 5541158 2.91% 5541155
chr5 6700316 3.69% 6700310
chr6 6849281 4.01% 6849280
chr7 5701771 3.58% 5701769
chr8 5304312 3.65% 5304308
chr9 4860103 3.51% 4860103
chr10 5777544 4.32% 5777539
chr11 5770761 4.27% 5770757
chr12 5410897 4.06% 5410896
chr13 3004205 2.63% 3004203
chr14 3460259 3.23% 3460257
chr15 3588076 3.52% 3588074
chr16 3424945 3.79% 3424943
chr17 4530895 5.44% 4530894
chr18 2495310 3.10% 2495309
chr19 3502436 5.98% 3502435
chr20 2895394 4.49% 2895392
chr21 1255182 2.69% 1255182
chr22 1841633 3.62% 1841633
chrX 2719516 1.74% 2719514
432 contigs with no values (178243688 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 111740262 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Skin_c6__mean_pred_corrected.bw 846.77 MB 376a379f4f17b83cddbc7c87d247b388
genomic_resource.yaml 1.27 KB 7521ec6d12324ac41dd22749147723c5
statistics/