Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c7/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Skin for cell cluster c7
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c7
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c7_mean_counts_contribs float

liu2026Multiomics_Skin_c7_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Skin_c7_mean_counts_contribs [-0.148, 0.21]
n
244,028,443
mean
0.000421
sd
0.00428

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2440284437.60% 242400866
chr1 21977001 8.83% 21830476
chr2 20783072 8.58% 20644118
chr3 16357259 8.25% 16246285
chr4 12575618 6.61% 12487440
chr5 14545798 8.01% 14447872
chr6 15125846 8.86% 15024485
chr7 12759615 8.01% 12673770
chr8 11579006 7.98% 11501032
chr9 10708346 7.74% 10637545
chr10 12508557 9.35% 12425794
chr11 12472134 9.23% 12390896
chr12 11540521 8.66% 11463360
chr13 6782682 5.93% 6736229
chr14 7602505 7.10% 7552333
chr15 7766425 7.61% 7714386
chr16 7298143 8.08% 7251264
chr17 9521849 11.44% 9460144
chr18 5610062 6.98% 5571181
chr19 7072714 12.07% 7029385
chr20 6441249 10.00% 6399219
chr21 2913043 6.24% 2893979
chr22 4024551 7.92% 3998666
chrX 6062447 3.89% 6021007
432 contigs with no values (178243688 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 242400866 1 938 1.01 1
global segment-length histogram

Files

Filename Size md5
Skin_c7__mean_counts_contribs.bw 1.47 GB bf2693f68b17fff222f402537b76e834
genomic_resource.yaml 1.3 KB bffb24d9e78d953b8aeb02440d501754
statistics/