Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c7/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Skin for cell cluster c7
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c7
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c7_mean_pred_corrected float

liu2026Multiomics_Skin_c7_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Skin_c7_mean_pred_corrected [0.00353, 32.8]
n
129,042,116
mean
0.226
sd
0.555

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1290421164.02% 129042006
chr1 11675056 4.69% 11675050
chr2 10966344 4.53% 10966337
chr3 8610344 4.34% 8610337
chr4 6593697 3.47% 6593688
chr5 7672601 4.23% 7672596
chr6 7999258 4.68% 7999252
chr7 6704225 4.21% 6704216
chr8 6087016 4.19% 6087008
chr9 5682107 4.11% 5682103
chr10 6594710 4.93% 6594701
chr11 6643203 4.92% 6643193
chr12 6117038 4.59% 6117033
chr13 3542241 3.10% 3542236
chr14 4022648 3.76% 4022647
chr15 4112124 4.03% 4112124
chr16 3868054 4.28% 3868051
chr17 5100931 6.13% 5100926
chr18 2928854 3.64% 2928852
chr19 3848486 6.57% 3848483
chr20 3402006 5.28% 3402003
chr21 1545917 3.31% 1545917
chr22 2135932 4.20% 2135931
chrX 3189324 2.04% 3189322
432 contigs with no values (178243688 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 129042006 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Skin_c7__mean_pred_corrected.bw 978.01 MB c25179fab14376695f66ae8f15e6cb78
genomic_resource.yaml 1.27 KB 0fbe81ea0d92ab94f0c18e91a181830d
statistics/