Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c8/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Skin for cell cluster c8
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c8
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c8_mean_counts_contribs float

liu2026Multiomics_Skin_c8_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Skin_c8_mean_counts_contribs [-0.0454, 0.139]
n
161,830,760
mean
0.000205
sd
0.00307

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1618307605.04% 160546061
chr1 15574269 6.26% 15451460
chr2 13538743 5.59% 13429665
chr3 10557396 5.32% 10471243
chr4 7372681 3.88% 7309670
chr5 8948217 4.93% 8876109
chr6 9844502 5.76% 9765770
chr7 8174301 5.13% 8108239
chr8 7273724 5.01% 7215539
chr9 7175574 5.18% 7119011
chr10 8108441 6.06% 8043996
chr11 8575299 6.35% 8508320
chr12 7869908 5.91% 7807662
chr13 3926911 3.43% 3894800
chr14 5006183 4.68% 4967013
chr15 5119453 5.02% 5078903
chr16 5325285 5.89% 5285611
chr17 7265529 8.73% 7210328
chr18 3302629 4.11% 3274705
chr19 5959738 10.17% 5916759
chr20 4450915 6.91% 4416305
chr21 1938446 4.15% 1922715
chr22 3139363 6.18% 3115778
chrX 3381139 2.17% 3354371
chrY 2114 <0.01% 2089
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 160546061 1 995 1.01 1
global segment-length histogram

Files

Filename Size md5
Skin_c8__mean_counts_contribs.bw 994.4 MB 58efdae88e39ca2a92bf6370373597ef
genomic_resource.yaml 1.3 KB 19b6e00f8814e6f06994d889c214655e
statistics/