Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c8/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Skin for cell cluster c8
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c8
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c8_mean_pred_corrected float

liu2026Multiomics_Skin_c8_mean_pred_corrected
bias-corrected accessibility predicted by ChromBPNet
 HISTOGRAM FOR liu2026Multiomics_Skin_c8_mean_pred_corrected [0.000218, 21.6]
n
85,262,917
mean
0.172
sd
0.364

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 852629172.66% 85262880
chr1 8237229 3.31% 8237225
chr2 7090209 2.93% 7090206
chr3 5516060 2.78% 5516057
chr4 3836839 2.02% 3836835
chr5 4685220 2.58% 4685218
chr6 5192077 3.04% 5192075
chr7 4269839 2.68% 4269835
chr8 3796786 2.62% 3796785
chr9 3793314 2.74% 3793314
chr10 4265228 3.19% 4265227
chr11 4529407 3.35% 4529406
chr12 4147425 3.11% 4147423
chr13 2043032 1.79% 2043030
chr14 2650346 2.48% 2650343
chr15 2699519 2.65% 2699519
chr16 2838441 3.14% 2838438
chr17 3895210 4.68% 3895209
chr18 1722389 2.14% 1722388
chr19 3243780 5.53% 3243780
chr20 2331545 3.62% 2331545
chr21 1022481 2.19% 1022481
chr22 1660578 3.27% 1660578
chrX 1794963 1.15% 1794963
chrY 1000 <0.01% 1000
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 85262880 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Skin_c8__mean_pred_corrected.bw 644.37 MB 100cc2f32bc02d73480dbc7b21574845
genomic_resource.yaml 1.27 KB 0ce3671cd5c2a752a665f2b6f3bbefeb
statistics/