Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c9/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Skin for cell cluster c9
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c9
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c9_mean_counts_contribs float

liu2026Multiomics_Skin_c9_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Skin_c9_mean_counts_contribs [-0.13, 0.187]
n
204,064,259
mean
0.000397
sd
0.00439

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2040642596.36% 202593046
chr1 18451713 7.41% 18320185
chr2 17401560 7.18% 17275277
chr3 13641558 6.88% 13541759
chr4 10300613 5.42% 10222711
chr5 12438030 6.85% 12347693
chr6 12427959 7.28% 12337082
chr7 10482297 6.58% 10405951
chr8 9474133 6.53% 9404807
chr9 9021922 6.52% 8955797
chr10 10552588 7.89% 10476543
chr11 10356095 7.67% 10282835
chr12 9708516 7.28% 9639114
chr13 5388015 4.71% 5347943
chr14 6303893 5.89% 6258354
chr15 6532920 6.41% 6486267
chr16 6126375 6.78% 6083389
chr17 8106008 9.74% 8050331
chr18 4855815 6.04% 4820162
chr19 5994035 10.23% 5954389
chr20 5498453 8.53% 5459397
chr21 2333228 5.00% 2316304
chr22 3298680 6.49% 3276198
chrX 5367739 3.44% 5328462
chrY 2114 <0.01% 2096
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 202593046 1 884 1.01 1
global segment-length histogram

Files

Filename Size md5
Skin_c9__mean_counts_contribs.bw 1.23 GB 1eb8050c281cd5233ac237b505de5c5f
genomic_resource.yaml 1.3 KB 05f1572d8950e5650b6e261a5d05656c
statistics/