Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c9/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Skin for cell cluster c9
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c9
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c9_mean_pred_corrected float

liu2026Multiomics_Skin_c9_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Skin_c9_mean_pred_corrected [0.00176, 14.7]
n
105,882,087
mean
0.118
sd
0.266

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1058820873.30% 105882031
chr1 9622033 3.86% 9622029
chr2 8988007 3.71% 8988001
chr3 7043703 3.55% 7043698
chr4 5286158 2.78% 5286157
chr5 6443994 3.55% 6443989
chr6 6435927 3.77% 6435923
chr7 5420537 3.40% 5420534
chr8 4878755 3.36% 4878754
chr9 4687963 3.39% 4687962
chr10 5464617 4.08% 5464615
chr11 5394181 3.99% 5394179
chr12 5050457 3.79% 5050454
chr13 2758465 2.41% 2758464
chr14 3274840 3.06% 3274839
chr15 3386995 3.32% 3386992
chr16 3187967 3.53% 3187966
chr17 4284319 5.15% 4284316
chr18 2489514 3.10% 2489512
chr19 3221291 5.50% 3221287
chr20 2856897 4.43% 2856893
chr21 1210907 2.59% 1210907
chr22 1719707 3.38% 1719707
chrX 2773853 1.78% 2773853
chrY 1000 <0.01% 1000
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 105882031 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Skin_c9__mean_pred_corrected.bw 803.99 MB f05d90f48a224c5174e9fe63bbea8cc5
genomic_resource.yaml 1.27 KB 6912c88c964fcd00627ef17cb5395a36
statistics/