Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Spleen/c0/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Spleen for cell cluster c0
Description
Labels
  • assay: SHARE-seq
  • cluster: Spleen_c0
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Spleen
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Spleen_c0_obs_pval_signal float

liu2026Multiomics_Spleen_c0_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Spleen_c0_obs_pval_signal [0, 3.98e+03]
n
3,087,291,809
mean
0.894
sd
13.7

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308729180996.20% 133436355
chr1 248946468 >99.99% 11705798
chr2 242183501 >99.99% 11170800
chr3 198232672 99.97% 8941683
chr4 190204559 99.99% 7107935
chr5 181477761 99.97% 7255985
chr6 170739857 99.96% 7786705
chr7 159335945 99.99% 6744893
chr8 145075954 99.96% 6051385
chr9 138309983 99.94% 5748659
chr10 133787445 99.99% 6803354
chr11 135076556 99.99% 7060178
chr12 133265010 99.99% 6508001
chr13 114353955 99.99% 3720082
chr14 106883752 99.85% 4305859
chr15 101981166 99.99% 4267627
chr16 90228290 99.88% 4304613
chr17 83247366 99.99% 5711427
chr18 80263248 99.86% 3017127
chr19 58607601 99.98% 4512029
chr20 64334079 99.83% 3453636
chr21 46699972 99.98% 1574645
chr22 50808458 99.98% 2688652
chrX 156030846 99.99% 2866817
chrY 57217365 99.98% 128465
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 133436355 1 30001131 23.14 6
global segment-length histogram

Files

Filename Size md5
Spleen_c0__obs_pval_signal.bw 788.19 MB c94ad645029b23d892877dd5afb3cdd0
genomic_resource.yaml 1.24 KB e1612575a722edfbcfb6c251f9e3b621
statistics/