Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Spleen/c3/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Spleen for cell cluster c3 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Spleen_c3_mean_counts_contribs | float |
liu2026Multiomics_Spleen_c3_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0766, 0.233] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 169557115 | 5.28% | 168670479 |
| chr1 | 16073753 | 6.46% | 15989934 |
| chr2 | 13714838 | 5.66% | 13642688 |
| chr3 | 11024843 | 5.56% | 10964989 |
| chr4 | 7486472 | 3.94% | 7443171 |
| chr5 | 8498275 | 4.68% | 8453407 |
| chr6 | 10624071 | 6.22% | 10568542 |
| chr7 | 8484818 | 5.32% | 8440976 |
| chr8 | 7394632 | 5.09% | 7356254 |
| chr9 | 7092136 | 5.12% | 7054265 |
| chr10 | 8171871 | 6.11% | 8129590 |
| chr11 | 8419224 | 6.23% | 8376989 |
| chr12 | 8709368 | 6.53% | 8663332 |
| chr13 | 3979995 | 3.48% | 3958621 |
| chr14 | 5735167 | 5.36% | 5704649 |
| chr15 | 5517378 | 5.41% | 5488919 |
| chr16 | 5801282 | 6.42% | 5773585 |
| chr17 | 8076574 | 9.70% | 8036949 |
| chr18 | 3486578 | 4.34% | 3466166 |
| chr19 | 6903476 | 11.78% | 6871823 |
| chr20 | 4519219 | 7.01% | 4496581 |
| chr21 | 1989644 | 4.26% | 1978056 |
| chr22 | 3756361 | 7.39% | 3737861 |
| chrX | 3987207 | 2.56% | 3965873 |
| chrY | 109933 | 0.19% | 107259 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 168670479 | 1 | 2114 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Spleen_c3__mean_counts_contribs.bw | 1.02 GB | ab1616a841027841352ce7596126a05c |
| genomic_resource.yaml | 1.31 KB | bb14a747f3c4512228eb37a9c91139be |
| statistics/ |
