Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Spleen/c4/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Spleen for cell cluster c4 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Spleen_c4_mean_counts_contribs | float |
liu2026Multiomics_Spleen_c4_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0779, 0.17] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 176167248 | 5.49% | 174989211 |
| chr1 | 16632462 | 6.68% | 16521367 |
| chr2 | 14525484 | 6.00% | 14428104 |
| chr3 | 11664086 | 5.88% | 11584384 |
| chr4 | 8529355 | 4.48% | 8469109 |
| chr5 | 9390108 | 5.17% | 9327063 |
| chr6 | 10553083 | 6.18% | 10482613 |
| chr7 | 8676416 | 5.45% | 8618794 |
| chr8 | 7891743 | 5.44% | 7838615 |
| chr9 | 7541422 | 5.45% | 7491700 |
| chr10 | 8890765 | 6.64% | 8830589 |
| chr11 | 9214379 | 6.82% | 9153547 |
| chr12 | 8819769 | 6.62% | 8761014 |
| chr13 | 4533389 | 3.96% | 4502378 |
| chr14 | 5692257 | 5.32% | 5654587 |
| chr15 | 5835585 | 5.72% | 5796750 |
| chr16 | 5616657 | 6.22% | 5580600 |
| chr17 | 7783974 | 9.35% | 7733729 |
| chr18 | 3764571 | 4.68% | 3737647 |
| chr19 | 6451802 | 11.01% | 6411943 |
| chr20 | 4674298 | 7.25% | 4644022 |
| chr21 | 1973309 | 4.22% | 1959776 |
| chr22 | 3394309 | 6.68% | 3372959 |
| chrX | 4031441 | 2.58% | 4003980 |
| chrY | 86584 | 0.15% | 83941 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 174989211 | 1 | 2114 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Spleen_c4__mean_counts_contribs.bw | 1.06 GB | d2f06ffec218e96a9bff6213c1402409 |
| genomic_resource.yaml | 1.31 KB | 36786b2fcb336548b7268859a5210c7a |
| statistics/ |
