Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Spleen/c5/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Spleen for cell cluster c5
Description
Labels
  • assay: SHARE-seq
  • cluster: Spleen_c5
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Spleen
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Spleen_c5_obs_pval_signal float

liu2026Multiomics_Spleen_c5_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Spleen_c5_obs_pval_signal [0, 2.33e+03]
n
3,087,286,527
mean
0.417
sd
3.85

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308728652796.20% 62602827
chr1 248946462 >99.99% 5774764
chr2 242183501 >99.99% 4838351
chr3 198220544 99.96% 3915046
chr4 190204519 99.99% 2628015
chr5 181477761 99.97% 3128353
chr6 170742108 99.96% 3605133
chr7 159335924 99.99% 3075068
chr8 145075979 99.96% 2636464
chr9 138318541 99.94% 2658088
chr10 133787439 99.99% 3115802
chr11 135076556 99.99% 3314569
chr12 133265011 99.99% 3077259
chr13 114353928 99.99% 1481184
chr14 106883722 99.85% 2097927
chr15 101981137 99.99% 2053735
chr16 90224785 99.87% 2385360
chr17 83247319 99.99% 3330990
chr18 80263247 99.86% 1279986
chr19 58607600 99.98% 2835282
chr20 64333930 99.83% 1771573
chr21 46699971 99.98% 814873
chr22 50808338 99.98% 1535980
chrX 156030846 99.99% 1218662
chrY 57217359 99.98% 30363
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 62602827 1 30013377 49.32 10
global segment-length histogram

Files

Filename Size md5
Spleen_c5__obs_pval_signal.bw 366.93 MB 58231edf91f881bb0946d4c3ff983cec
genomic_resource.yaml 1.24 KB 97912aacfd061485e5c8fa797e99e380
statistics/