Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Spleen/c6/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Spleen for cell cluster c6
Description
Labels
  • assay: SHARE-seq
  • cluster: Spleen_c6
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Spleen
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Spleen_c6_mean_pred_corrected float

liu2026Multiomics_Spleen_c6_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Spleen_c6_mean_pred_corrected [0.00337, 17.7]
n
95,359,232
mean
0.164
sd
0.307

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 953592322.97% 95358247
chr1 8975903 3.61% 8975896
chr2 7858513 3.24% 7858511
chr3 6229021 3.14% 6229020
chr4 4527992 2.38% 4527986
chr5 5140154 2.83% 5140152
chr6 5685764 3.33% 5685762
chr7 4830718 3.03% 4830715
chr8 4323141 2.98% 4323141
chr9 4047369 2.92% 4047365
chr10 4745727 3.55% 4745724
chr11 4881646 3.61% 4881643
chr12 4740436 3.56% 4740434
chr13 2474606 2.16% 2474605
chr14 3113067 2.91% 3113066
chr15 3152994 3.09% 3152990
chr16 3154716 3.49% 3154715
chr17 4262719 5.12% 4262716
chr18 2131095 2.65% 2131093
chr19 3506104 5.98% 3506101
chr20 2513060 3.90% 2513059
chr21 1060201 2.27% 1060201
chr22 1788732 3.52% 1788729
chrX 2162359 1.39% 2162358
chrY 53195 0.09% 52265
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 95358247 1 910 1 1
global segment-length histogram

Files

Filename Size md5
Spleen_c6__mean_pred_corrected.bw 722.22 MB 7a018171123cf3e66c435f732a0cb8db
genomic_resource.yaml 1.28 KB 970cc9d8e9437250ec1cdc88b1a411ad
statistics/