Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Spleen/c8/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Spleen for cell cluster c8
Description
Labels
  • assay: SHARE-seq
  • cluster: Spleen_c8
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Spleen
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Spleen_c8_mean_pred_corrected float

liu2026Multiomics_Spleen_c8_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Spleen_c8_mean_pred_corrected [0.00205, 15.7]
n
70,801,516
mean
0.147
sd
0.28

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 708015162.21% 70800543
chr1 7002086 2.81% 7002083
chr2 5448030 2.25% 5448029
chr3 4581948 2.31% 4581945
chr4 2989769 1.57% 2989768
chr5 3441683 1.90% 3441681
chr6 4203002 2.46% 4202999
chr7 3560266 2.23% 3560265
chr8 2985535 2.06% 2985530
chr9 2908770 2.10% 2908770
chr10 3448327 2.58% 3448327
chr11 3740403 2.77% 3740403
chr12 3545310 2.66% 3545309
chr13 1604035 1.40% 1604034
chr14 2354663 2.20% 2354663
chr15 2305681 2.26% 2305681
chr16 2494726 2.76% 2494725
chr17 3554855 4.27% 3554855
chr18 1360000 1.69% 1359999
chr19 3319071 5.66% 3319071
chr20 1972349 3.06% 1972347
chr21 736936 1.58% 736936
chr22 1549292 3.05% 1549292
chrX 1665985 1.07% 1665984
chrY 28794 0.05% 27847
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 70800543 1 910 1 1
global segment-length histogram

Files

Filename Size md5
Spleen_c8__mean_pred_corrected.bw 536.99 MB a8c7bb91e33cdf3e60df6f96955b9687
genomic_resource.yaml 1.28 KB 85d8a1c083cc394881384ca205e42c51
statistics/