Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c0/mean_pred_corrected |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_pred_corrected for Stomach for cell cluster c0 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Stomach_c0_mean_pred_corrected | float |
liu2026Multiomics_Stomach_c0_mean_pred_corrected |
bias-corrected accessibility predicted by ChromBPNet
|
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[0.000228, 74.8] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 109579389 | 3.41% | 109578374 |
| chr1 | 10521311 | 4.23% | 10521299 |
| chr2 | 8728671 | 3.60% | 8728665 |
| chr3 | 6996799 | 3.53% | 6996795 |
| chr4 | 5181937 | 2.72% | 5181936 |
| chr5 | 5647073 | 3.11% | 5647065 |
| chr6 | 6554983 | 3.84% | 6554980 |
| chr7 | 5628952 | 3.53% | 5628949 |
| chr8 | 4667709 | 3.22% | 4667705 |
| chr9 | 4733367 | 3.42% | 4733365 |
| chr10 | 5137018 | 3.84% | 5137011 |
| chr11 | 5802394 | 4.30% | 5802389 |
| chr12 | 5238850 | 3.93% | 5238846 |
| chr13 | 2786415 | 2.44% | 2786415 |
| chr14 | 3540332 | 3.31% | 3540331 |
| chr15 | 3572216 | 3.50% | 3572212 |
| chr16 | 3769027 | 4.17% | 3769025 |
| chr17 | 5112964 | 6.14% | 5112962 |
| chr18 | 2270869 | 2.83% | 2270868 |
| chr19 | 4320385 | 7.37% | 4320383 |
| chr20 | 2921811 | 4.53% | 2921807 |
| chr21 | 1302985 | 2.79% | 1302985 |
| chr22 | 2262957 | 4.45% | 2262956 |
| chrX | 2832384 | 1.82% | 2832381 |
| chrY | 47980 | 0.08% | 47044 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 109578374 | 1 | 910 | 1 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Stomach_c0__mean_pred_corrected.bw | 829.24 MB | 1dca646b79f371e0a179a39c3eee5d30 |
| genomic_resource.yaml | 1.28 KB | 2707b063dd04e8259195be181e9f82c9 |
| statistics/ |
