Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c0/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Stomach for cell cluster c0
Description
Labels
  • assay: SHARE-seq
  • cluster: Stomach_c0
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Stomach
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Stomach_c0_obs_pval_signal float

liu2026Multiomics_Stomach_c0_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Stomach_c0_obs_pval_signal [0, 4.92e+03]
n
3,087,293,253
mean
0.589
sd
8.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308729325396.20% 167324476
chr1 248946474 >99.99% 15554108
chr2 242183502 >99.99% 12963823
chr3 198232672 99.97% 10747396
chr4 190204548 99.99% 8365106
chr5 181476390 99.97% 8803261
chr6 170744013 99.96% 9425545
chr7 159335903 99.99% 8536636
chr8 145077151 99.96% 7158007
chr9 138309961 99.94% 7264559
chr10 133787446 99.99% 7627862
chr11 135076572 99.99% 8585826
chr12 133265010 99.99% 8100165
chr13 114354066 99.99% 4551491
chr14 106883704 99.85% 5523749
chr15 101981143 99.99% 5399304
chr16 90225864 99.88% 5985997
chr17 83247391 99.99% 7648551
chr18 80263248 99.86% 3531079
chr19 58607600 99.98% 6634468
chr20 64333966 99.83% 4567784
chr21 46699977 99.98% 2203438
chr22 50808435 99.98% 3859371
chrX 156030846 99.99% 4184818
chrY 57217371 99.98% 102132
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 167324476 1 30002030 18.45 5
global segment-length histogram

Files

Filename Size md5
Stomach_c0__obs_pval_signal.bw 991.11 MB c26a77e2703a9cb2b088feeef18a8d03
genomic_resource.yaml 1.24 KB 133c49479ec8067c602a0201139463f3
statistics/