Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c1/mean_pred_corrected |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_pred_corrected for Stomach for cell cluster c1 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Stomach_c1_mean_pred_corrected | float |
liu2026Multiomics_Stomach_c1_mean_pred_corrected |
bias-corrected accessibility predicted by ChromBPNet
|
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[0.000142, 148] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 145215357 | 4.52% | 145213799 |
| chr1 | 13778818 | 5.53% | 13778803 |
| chr2 | 11923160 | 4.92% | 11923145 |
| chr3 | 9393227 | 4.74% | 9393214 |
| chr4 | 7013908 | 3.69% | 7013894 |
| chr5 | 7565999 | 4.17% | 7565990 |
| chr6 | 8744424 | 5.12% | 8744410 |
| chr7 | 7517156 | 4.72% | 7517151 |
| chr8 | 6396002 | 4.41% | 6395995 |
| chr9 | 6371940 | 4.60% | 6371929 |
| chr10 | 7307458 | 5.46% | 7307456 |
| chr11 | 7649994 | 5.66% | 7649987 |
| chr12 | 7094101 | 5.32% | 7094095 |
| chr13 | 3738024 | 3.27% | 3738021 |
| chr14 | 4648377 | 4.34% | 4648373 |
| chr15 | 4828396 | 4.73% | 4828393 |
| chr16 | 4976571 | 5.51% | 4976568 |
| chr17 | 6400267 | 7.69% | 6400264 |
| chr18 | 3041001 | 3.78% | 3040998 |
| chr19 | 4941193 | 8.43% | 4941191 |
| chr20 | 3973773 | 6.17% | 3973767 |
| chr21 | 1812543 | 3.88% | 1812541 |
| chr22 | 2945821 | 5.80% | 2945819 |
| chrX | 3093910 | 1.98% | 3093909 |
| chrY | 59294 | 0.10% | 57886 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 145213799 | 1 | 1330 | 1 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Stomach_c1__mean_pred_corrected.bw | 1.07 GB | 416764e3fe918ded517c9daf2f4475cb |
| genomic_resource.yaml | 1.28 KB | eb20abb662ab16d51979cc87969e244f |
| statistics/ |
