Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c1/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Stomach for cell cluster c1
Description
Labels
  • assay: SHARE-seq
  • cluster: Stomach_c1
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Stomach
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Stomach_c1_obs_pval_signal float

liu2026Multiomics_Stomach_c1_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Stomach_c1_obs_pval_signal [0, 1.95e+04]
n
3,087,320,784
mean
1.02
sd
18.4

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308732078496.20% 305022588
chr1 248946468 >99.99% 26612627
chr2 242183502 >99.99% 24992655
chr3 198232665 99.97% 20534825
chr4 190204572 99.99% 17151399
chr5 181477761 99.97% 17208099
chr6 170742229 99.96% 17802873
chr7 159335945 99.99% 16286406
chr8 145078535 99.96% 14061311
chr9 138334052 99.96% 13058141
chr10 133787445 99.99% 14779500
chr11 135076621 99.99% 15588204
chr12 133265010 99.99% 14752323
chr13 114354067 99.99% 8902089
chr14 106883727 99.85% 9832021
chr15 101981162 99.99% 9141945
chr16 90228198 99.88% 10016028
chr17 83247391 99.99% 11981257
chr18 80263248 99.86% 7184370
chr19 58607600 99.98% 9202124
chr20 64333938 99.83% 7623428
chr21 46699978 99.98% 3948134
chr22 50808459 99.98% 5887233
chrX 156030845 99.99% 8110290
chrY 57217366 99.98% 365306
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 305022588 1 30001592 10.12 5
global segment-length histogram

Files

Filename Size md5
Stomach_c1__obs_pval_signal.bw 1.69 GB ab9e05c0c444e42e8feb732e46d7a8d1
genomic_resource.yaml 1.24 KB a79f010bc472f4ef28c9d89b05ec3bb3
statistics/