Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c10/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Stomach for cell cluster c10
Description
Labels
  • assay: SHARE-seq
  • cluster: Stomach_c10
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Stomach
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Stomach_c10_obs_pval_signal float

liu2026Multiomics_Stomach_c10_obs_pval_signal
Macs2 p-value signal track for observed accessibility
 HISTOGRAM FOR liu2026Multiomics_Stomach_c10_obs_pval_signal [0, 4.87e+03]
n
3,087,314,287
mean
0.39
sd
3.18

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308731428796.20% 62446610
chr1 248946468 >99.99% 5854049
chr2 242183500 >99.99% 4886884
chr3 198232665 99.97% 3959354
chr4 190204555 99.99% 2926471
chr5 181477761 99.97% 3255374
chr6 170739104 99.96% 3513751
chr7 159335912 99.99% 3207712
chr8 145076001 99.96% 2618946
chr9 138333697 99.96% 2732255
chr10 133787445 99.99% 2943876
chr11 135076621 99.99% 3375904
chr12 133265010 99.99% 3086058
chr13 114354035 99.99% 1572076
chr14 106883696 99.85% 2019903
chr15 101981161 99.99% 1930932
chr16 90228198 99.88% 2344422
chr17 83247271 99.99% 3068214
chr18 80263247 99.86% 1269750
chr19 58607593 99.98% 2775740
chr20 64333938 99.83% 1674749
chr21 46699972 99.98% 774946
chr22 50808345 99.98% 1489628
chrX 156030780 99.99% 1139679
chrY 57217312 99.98% 25937
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 62446610 1 30005210 49.44 12
global segment-length histogram

Files

Filename Size md5
Stomach_c10__obs_pval_signal.bw 358.78 MB ff3b5735180dfecc3a3d100b6d95e3f8
genomic_resource.yaml 1.25 KB c7bdefbc4681c3f4a9f7e7fd1c4d2384
statistics/