Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c11/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Stomach for cell cluster c11 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Stomach_c11_mean_counts_contribs | float |
liu2026Multiomics_Stomach_c11_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0658, 0.151] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 125772999 | 3.92% | 124950237 |
| chr1 | 12450467 | 5.00% | 12369341 |
| chr2 | 9946290 | 4.11% | 9881155 |
| chr3 | 7769830 | 3.92% | 7718151 |
| chr4 | 5867449 | 3.08% | 5826080 |
| chr5 | 6609492 | 3.64% | 6566275 |
| chr6 | 7274798 | 4.26% | 7227140 |
| chr7 | 6254629 | 3.93% | 6213874 |
| chr8 | 5333258 | 3.67% | 5298503 |
| chr9 | 5594542 | 4.04% | 5558435 |
| chr10 | 6344432 | 4.74% | 6301970 |
| chr11 | 6808284 | 5.04% | 6765077 |
| chr12 | 6199535 | 4.65% | 6159239 |
| chr13 | 2909157 | 2.54% | 2889904 |
| chr14 | 4193038 | 3.92% | 4166112 |
| chr15 | 4174628 | 4.09% | 4147240 |
| chr16 | 4396351 | 4.87% | 4368953 |
| chr17 | 5965180 | 7.16% | 5927527 |
| chr18 | 2434800 | 3.03% | 2416872 |
| chr19 | 5116586 | 8.73% | 5085474 |
| chr20 | 3324137 | 5.16% | 3302914 |
| chr21 | 1346643 | 2.88% | 1337760 |
| chr22 | 2491828 | 4.90% | 2476380 |
| chrX | 2936188 | 1.88% | 2916687 |
| chrY | 31457 | 0.05% | 29174 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 124950237 | 1 | 2114 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Stomach_c11__mean_counts_contribs.bw | 774.19 MB | ea8a6fbfad9c3df0879f58245670e0bf |
| genomic_resource.yaml | 1.32 KB | 178ebc026de21d8d7b3f39f88fe76bb6 |
| statistics/ |
