Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c11/mean_pred_corrected |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_pred_corrected for Stomach for cell cluster c11 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Stomach_c11_mean_pred_corrected | float |
liu2026Multiomics_Stomach_c11_mean_pred_corrected |
bias-corrected accessibility predicted by ChromBPNet
|
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[0.000808, 19.7] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 66752180 | 2.08% | 66751227 |
| chr1 | 6629585 | 2.66% | 6629582 |
| chr2 | 5259426 | 2.17% | 5259423 |
| chr3 | 4101148 | 2.07% | 4101144 |
| chr4 | 3089561 | 1.62% | 3089559 |
| chr5 | 3491459 | 1.92% | 3491456 |
| chr6 | 3866058 | 2.26% | 3866057 |
| chr7 | 3300298 | 2.07% | 3300298 |
| chr8 | 2817628 | 1.94% | 2817628 |
| chr9 | 2962986 | 2.14% | 2962985 |
| chr10 | 3354612 | 2.51% | 3354611 |
| chr11 | 3631151 | 2.69% | 3631151 |
| chr12 | 3292374 | 2.47% | 3292373 |
| chr13 | 1534972 | 1.34% | 1534971 |
| chr14 | 2231565 | 2.08% | 2231565 |
| chr15 | 2212935 | 2.17% | 2212935 |
| chr16 | 2337417 | 2.59% | 2337416 |
| chr17 | 3205433 | 3.85% | 3205430 |
| chr18 | 1277993 | 1.59% | 1277993 |
| chr19 | 2787317 | 4.76% | 2787317 |
| chr20 | 1752054 | 2.72% | 1752054 |
| chr21 | 710605 | 1.52% | 710605 |
| chr22 | 1313991 | 2.59% | 1313991 |
| chrX | 1574060 | 1.01% | 1574060 |
| chrY | 17552 | 0.03% | 16623 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 66751227 | 1 | 911 | 1 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Stomach_c11__mean_pred_corrected.bw | 505.8 MB | e6ea459bd3820b52b50b1372f98b4da5 |
| genomic_resource.yaml | 1.29 KB | e6aa473ba479cee747e1f59182115e8b |
| statistics/ |
