Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c11/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Stomach for cell cluster c11
Description
Labels
  • assay: SHARE-seq
  • cluster: Stomach_c11
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Stomach
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Stomach_c11_obs_pval_signal float

liu2026Multiomics_Stomach_c11_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Stomach_c11_obs_pval_signal [0, 2.37e+03]
n
3,087,244,672
mean
0.363
sd
2.4

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308724467296.20% 43246514
chr1 248946462 >99.99% 4047001
chr2 242183476 >99.99% 3383481
chr3 198220301 99.96% 2692817
chr4 190203810 99.99% 2094558
chr5 181473617 99.96% 2295468
chr6 170741835 99.96% 2366454
chr7 159335901 99.99% 2233208
chr8 145076001 99.96% 1816846
chr9 138281442 99.92% 1946504
chr10 133787439 99.99% 2090951
chr11 135076618 99.99% 2378653
chr12 133264955 99.99% 2165764
chr13 114353981 99.99% 1045374
chr14 106883648 99.85% 1432966
chr15 101981161 99.99% 1322807
chr16 90226199 99.88% 1617335
chr17 83247266 99.99% 2096330
chr18 80263247 99.86% 838414
chr19 58607562 99.98% 1995694
chr20 64333444 99.83% 1102039
chr21 46699978 99.98% 495156
chr22 50808357 99.98% 944099
chrX 156030774 99.99% 838397
chrY 57217198 99.98% 6198
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 43246514 1 30006115 71.39 14
global segment-length histogram

Files

Filename Size md5
Stomach_c11__obs_pval_signal.bw 251.37 MB 1732b030c474deec361e4fa9c8415968
genomic_resource.yaml 1.25 KB 3e5d962bd23bd6bebabb496f6d8d27bb
statistics/