Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c12/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Stomach for cell cluster c12 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Stomach_c12_mean_counts_contribs | float |
liu2026Multiomics_Stomach_c12_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
![]() |
[-0.0347, 0.0984] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 109414333 | 3.41% | 108465574 |
| chr1 | 10874746 | 4.37% | 10781019 |
| chr2 | 8640631 | 3.57% | 8563696 |
| chr3 | 6880455 | 3.47% | 6818364 |
| chr4 | 4735345 | 2.49% | 4689888 |
| chr5 | 5524888 | 3.04% | 5475246 |
| chr6 | 6327448 | 3.70% | 6271873 |
| chr7 | 5438101 | 3.41% | 5390596 |
| chr8 | 4769080 | 3.29% | 4726848 |
| chr9 | 4680843 | 3.38% | 4641243 |
| chr10 | 5326326 | 3.98% | 5280004 |
| chr11 | 6137680 | 4.54% | 6086014 |
| chr12 | 5499764 | 4.13% | 5451628 |
| chr13 | 2568800 | 2.25% | 2545398 |
| chr14 | 3484611 | 3.26% | 3455063 |
| chr15 | 3626075 | 3.56% | 3594261 |
| chr16 | 3834517 | 4.24% | 3803445 |
| chr17 | 5272649 | 6.33% | 5230139 |
| chr18 | 2044596 | 2.54% | 2025694 |
| chr19 | 4865045 | 8.30% | 4828170 |
| chr20 | 2941028 | 4.56% | 2916365 |
| chr21 | 1244562 | 2.66% | 1233041 |
| chr22 | 2191227 | 4.31% | 2173501 |
| chrX | 2480173 | 1.59% | 2458497 |
| chrY | 25743 | 0.04% | 25581 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 108465574 | 1 | 951 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Stomach_c12__mean_counts_contribs.bw | 671.78 MB | b128934d1553b3a6f326c40c80e0ec2a |
| genomic_resource.yaml | 1.32 KB | 732d6a97cf967a1a0f85287883a3f871 |
| statistics/ |
