Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c12/mean_pred_corrected |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_pred_corrected for Stomach for cell cluster c12 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Stomach_c12_mean_pred_corrected | float |
liu2026Multiomics_Stomach_c12_mean_pred_corrected |
bias-corrected accessibility predicted by ChromBPNet
|
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[0.00211, 11.2] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 57274765 | 1.78% | 57274750 |
| chr1 | 5700751 | 2.29% | 5700750 |
| chr2 | 4491570 | 1.85% | 4491568 |
| chr3 | 3585299 | 1.81% | 3585299 |
| chr4 | 2466919 | 1.30% | 2466918 |
| chr5 | 2871531 | 1.58% | 2871530 |
| chr6 | 3324792 | 1.95% | 3324791 |
| chr7 | 2829040 | 1.78% | 2829040 |
| chr8 | 2476962 | 1.71% | 2476962 |
| chr9 | 2445021 | 1.77% | 2445020 |
| chr10 | 2780758 | 2.08% | 2780756 |
| chr11 | 3234405 | 2.39% | 3234403 |
| chr12 | 2884072 | 2.16% | 2884072 |
| chr13 | 1333972 | 1.17% | 1333972 |
| chr14 | 1828318 | 1.71% | 1828318 |
| chr15 | 1891740 | 1.85% | 1891740 |
| chr16 | 2005817 | 2.22% | 2005817 |
| chr17 | 2794726 | 3.36% | 2794726 |
| chr18 | 1057254 | 1.32% | 1057254 |
| chr19 | 2626492 | 4.48% | 2626491 |
| chr20 | 1532646 | 2.38% | 1532644 |
| chr21 | 649507 | 1.39% | 649507 |
| chr22 | 1142831 | 2.25% | 1142831 |
| chrX | 1305739 | 0.84% | 1305738 |
| chrY | 14603 | 0.03% | 14603 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 57274750 | 1 | 2 | 1 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Stomach_c12__mean_pred_corrected.bw | 434.15 MB | dde38b70d9f21c18369784b2fbc38b39 |
| genomic_resource.yaml | 1.29 KB | 8d9978f3c8e8ec68b51f5501493910e3 |
| statistics/ |
