Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c12/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Stomach for cell cluster c12
Description
Labels
  • assay: SHARE-seq
  • cluster: Stomach_c12
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Stomach
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Stomach_c12_obs_pval_signal float

liu2026Multiomics_Stomach_c12_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Stomach_c12_obs_pval_signal [0, 2.22e+03]
n
3,087,223,665
mean
0.493
sd
1.66

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308722366596.20% 50331341
chr1 248946468 >99.99% 4606980
chr2 242183500 >99.99% 4044937
chr3 198220350 99.96% 3201442
chr4 190203753 99.99% 2608351
chr5 181477174 99.97% 2726565
chr6 170742229 99.96% 2852190
chr7 159335893 99.99% 2607622
chr8 145076001 99.96% 2245051
chr9 138256043 99.90% 2158654
chr10 133787439 99.99% 2384128
chr11 135076593 99.99% 2765214
chr12 133264961 99.99% 2489257
chr13 114354047 99.99% 1317196
chr14 106883698 99.85% 1582709
chr15 101981161 99.99% 1493921
chr16 90226229 99.88% 1769768
chr17 83247272 99.99% 2239013
chr18 80263246 99.86% 1060552
chr19 58607588 99.98% 2073425
chr20 64333522 99.83% 1262364
chr21 46699977 99.98% 597864
chr22 50808344 99.98% 1021822
chrX 156030832 99.99% 1191386
chrY 57217345 99.98% 30930
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 50331341 1 30005522 61.34 20
global segment-length histogram

Files

Filename Size md5
Stomach_c12__obs_pval_signal.bw 290.64 MB 6d0995f827ca65dfa92679abb7069914
genomic_resource.yaml 1.25 KB b452e3bceee2e37d92b1523c7dca00ec
statistics/