Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c13/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Stomach for cell cluster c13 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Stomach_c13_mean_counts_contribs | float |
liu2026Multiomics_Stomach_c13_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
![]() |
[-0.0899, 0.205] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 122800695 | 3.83% | 121915606 |
| chr1 | 11958496 | 4.80% | 11873562 |
| chr2 | 9533588 | 3.94% | 9463788 |
| chr3 | 7821055 | 3.94% | 7763055 |
| chr4 | 5670553 | 2.98% | 5627036 |
| chr5 | 6240248 | 3.44% | 6194603 |
| chr6 | 7373007 | 4.32% | 7319600 |
| chr7 | 6173686 | 3.87% | 6128738 |
| chr8 | 5265780 | 3.63% | 5227517 |
| chr9 | 5426999 | 3.92% | 5388237 |
| chr10 | 5601374 | 4.19% | 5561734 |
| chr11 | 6384571 | 4.73% | 6338718 |
| chr12 | 6258210 | 4.70% | 6212894 |
| chr13 | 2870454 | 2.51% | 2849139 |
| chr14 | 3971487 | 3.71% | 3943166 |
| chr15 | 3968434 | 3.89% | 3940036 |
| chr16 | 4332512 | 4.80% | 4302720 |
| chr17 | 5837328 | 7.01% | 5796279 |
| chr18 | 2557080 | 3.18% | 2537167 |
| chr19 | 4989733 | 8.51% | 4956479 |
| chr20 | 3283966 | 5.10% | 3260985 |
| chr21 | 1659599 | 3.55% | 1647168 |
| chr22 | 2687160 | 5.29% | 2668556 |
| chrX | 2809496 | 1.80% | 2789450 |
| chrY | 125879 | 0.22% | 124979 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 121915606 | 1 | 959 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Stomach_c13__mean_counts_contribs.bw | 755.13 MB | f7a4829549a249e5f0b96c103138d494 |
| genomic_resource.yaml | 1.32 KB | e4336f19b5fe77ccb08a0be3bb36e110 |
| statistics/ |
