Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c13/mean_pred_corrected |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_pred_corrected for Stomach for cell cluster c13 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Stomach_c13_mean_pred_corrected | float |
liu2026Multiomics_Stomach_c13_mean_pred_corrected |
bias-corrected accessibility predicted by ChromBPNet
|
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[0.00192, 13.1] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 63933071 | 1.99% | 63933058 |
| chr1 | 6259402 | 2.51% | 6259401 |
| chr2 | 4951023 | 2.04% | 4951023 |
| chr3 | 4054480 | 2.04% | 4054480 |
| chr4 | 2926657 | 1.54% | 2926657 |
| chr5 | 3230785 | 1.78% | 3230784 |
| chr6 | 3841384 | 2.25% | 3841383 |
| chr7 | 3184349 | 2.00% | 3184348 |
| chr8 | 2721720 | 1.88% | 2721720 |
| chr9 | 2822711 | 2.04% | 2822711 |
| chr10 | 2917262 | 2.18% | 2917258 |
| chr11 | 3329103 | 2.46% | 3329103 |
| chr12 | 3260642 | 2.45% | 3260642 |
| chr13 | 1486252 | 1.30% | 1486250 |
| chr14 | 2070629 | 1.93% | 2070628 |
| chr15 | 2053219 | 2.01% | 2053219 |
| chr16 | 2265529 | 2.51% | 2265529 |
| chr17 | 3079208 | 3.70% | 3079208 |
| chr18 | 1314841 | 1.64% | 1314840 |
| chr19 | 2673411 | 4.56% | 2673411 |
| chr20 | 1704902 | 2.65% | 1704902 |
| chr21 | 860424 | 1.84% | 860424 |
| chr22 | 1395858 | 2.75% | 1395857 |
| chrX | 1463184 | 0.94% | 1463184 |
| chrY | 66096 | 0.12% | 66096 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 63933058 | 1 | 2 | 1 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Stomach_c13__mean_pred_corrected.bw | 484.9 MB | b904897a320e19417ba83cfb44f4a2b3 |
| genomic_resource.yaml | 1.29 KB | 4b519c17327a916cbee4bc4a12c01706 |
| statistics/ |
