Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c13/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Stomach for cell cluster c13
Description
Labels
  • assay: SHARE-seq
  • cluster: Stomach_c13
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Stomach
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Stomach_c13_obs_pval_signal float

liu2026Multiomics_Stomach_c13_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Stomach_c13_obs_pval_signal [0, 1.45e+03]
n
3,087,221,943
mean
0.347
sd
1.82

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308722194396.20% 34083108
chr1 248946450 >99.99% 3233104
chr2 242182034 >99.99% 2506797
chr3 198190463 99.95% 2056611
chr4 190175619 99.98% 1434643
chr5 181475704 99.97% 1597480
chr6 170742229 99.96% 1874155
chr7 159335945 99.99% 1633836
chr8 145075888 99.96% 1373629
chr9 138318495 99.94% 1534888
chr10 133787435 99.99% 1550008
chr11 135076536 99.99% 1866270
chr12 133264969 99.99% 1699111
chr13 114353629 99.99% 775718
chr14 106883430 99.85% 1161575
chr15 101981161 99.99% 1026905
chr16 90225640 99.88% 1394289
chr17 83247265 99.99% 1961511
chr18 80263247 99.86% 688623
chr19 58607594 99.98% 1798565
chr20 64331611 99.83% 939208
chr21 46699960 99.98% 513535
chr22 50808436 99.98% 961591
chrX 156030837 99.99% 478155
chrY 57217366 99.98% 22901
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 34083108 1 30005685 90.58 13
global segment-length histogram

Files

Filename Size md5
Stomach_c13__obs_pval_signal.bw 199.43 MB 2756f0693525a1f7f84197da2de2a7ec
genomic_resource.yaml 1.25 KB 1740d0c998fa426aebe4a4a4f4a40cba
statistics/