Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c14/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Stomach for cell cluster c14 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Stomach_c14_mean_counts_contribs | float |
liu2026Multiomics_Stomach_c14_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0268, 0.0832] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 93206424 | 2.90% | 92300402 |
| chr1 | 9099576 | 3.66% | 9010788 |
| chr2 | 7250609 | 2.99% | 7179429 |
| chr3 | 5720878 | 2.89% | 5663921 |
| chr4 | 4233979 | 2.23% | 4189476 |
| chr5 | 4794329 | 2.64% | 4747260 |
| chr6 | 5487344 | 3.21% | 5434371 |
| chr7 | 4773537 | 3.00% | 4726134 |
| chr8 | 3986575 | 2.75% | 3947526 |
| chr9 | 3994992 | 2.89% | 3956795 |
| chr10 | 4557210 | 3.41% | 4512184 |
| chr11 | 5158014 | 3.82% | 5108504 |
| chr12 | 4719093 | 3.54% | 4673194 |
| chr13 | 2121233 | 1.85% | 2100350 |
| chr14 | 2934422 | 2.74% | 2905950 |
| chr15 | 3041054 | 2.98% | 3010804 |
| chr16 | 3283322 | 3.63% | 3252785 |
| chr17 | 4535858 | 5.45% | 4493621 |
| chr18 | 1722555 | 2.14% | 1704888 |
| chr19 | 4274278 | 7.29% | 4235783 |
| chr20 | 2444630 | 3.79% | 2421462 |
| chr21 | 959665 | 2.05% | 950553 |
| chr22 | 1835837 | 3.61% | 1818884 |
| chrX | 2239126 | 1.43% | 2217792 |
| chrY | 38308 | 0.07% | 37948 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 92300402 | 1 | 978 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Stomach_c14__mean_counts_contribs.bw | 572.14 MB | 5141b9ce4031ae75e52e9b5ffe20f3af |
| genomic_resource.yaml | 1.32 KB | 531edfc8ff350575e6f3106370846f88 |
| statistics/ |
