Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c14/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Stomach for cell cluster c14
Description
Labels
  • assay: SHARE-seq
  • cluster: Stomach_c14
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Stomach
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Stomach_c14_obs_pval_signal float

liu2026Multiomics_Stomach_c14_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Stomach_c14_obs_pval_signal [0, 1.14e+03]
n
3,087,301,608
mean
0.412
sd
1.15

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308730160896.20% 20927089
chr1 248946432 >99.99% 2019428
chr2 242182029 >99.99% 1570295
chr3 198223385 99.96% 1240066
chr4 190204541 99.99% 938778
chr5 181477717 99.97% 1005111
chr6 170739579 99.96% 1102047
chr7 159335945 99.99% 1080183
chr8 145075892 99.96% 840536
chr9 138334052 99.96% 939982
chr10 133787439 99.99% 1040050
chr11 135076511 99.99% 1170970
chr12 133264900 99.99% 1037884
chr13 114353770 99.99% 466385
chr14 106883727 99.85% 661500
chr15 101981155 99.99% 629874
chr16 90226443 99.88% 840962
chr17 83247265 99.99% 1140656
chr18 80263247 99.86% 376138
chr19 58607504 99.98% 1162587
chr20 64333450 99.83% 557717
chr21 46699977 99.98% 247222
chr22 50808458 99.98% 518935
chrX 156030832 99.99% 336079
chrY 57217358 99.98% 3704
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 20927089 1 30005780 147.53 19
global segment-length histogram

Files

Filename Size md5
Stomach_c14__obs_pval_signal.bw 121.01 MB 1fea04bd0f820da0021a7e7c63b8dd42
genomic_resource.yaml 1.25 KB 26bf4e92ada795ca2ba276d3f7f25a39
statistics/