Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c15/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Stomach for cell cluster c15 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Stomach_c15_mean_counts_contribs | float |
liu2026Multiomics_Stomach_c15_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
![]() |
[-0.0561, 0.239] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 146754001 | 4.57% | 145705091 |
| chr1 | 14034621 | 5.64% | 13935597 |
| chr2 | 11511328 | 4.75% | 11428245 |
| chr3 | 9791750 | 4.94% | 9720055 |
| chr4 | 6871179 | 3.61% | 6819772 |
| chr5 | 7426998 | 4.09% | 7373715 |
| chr6 | 9122304 | 5.34% | 9056746 |
| chr7 | 7729944 | 4.85% | 7674133 |
| chr8 | 6574789 | 4.53% | 6527556 |
| chr9 | 6545201 | 4.73% | 6498075 |
| chr10 | 6877700 | 5.14% | 6827934 |
| chr11 | 7719644 | 5.71% | 7665647 |
| chr12 | 7128583 | 5.35% | 7077414 |
| chr13 | 3626366 | 3.17% | 3599724 |
| chr14 | 4714860 | 4.40% | 4681482 |
| chr15 | 4820873 | 4.73% | 4786685 |
| chr16 | 5015055 | 5.55% | 4980486 |
| chr17 | 6615282 | 7.95% | 6569232 |
| chr18 | 3087338 | 3.84% | 3064496 |
| chr19 | 5523067 | 9.42% | 5485712 |
| chr20 | 3853931 | 5.98% | 3827169 |
| chr21 | 1916789 | 4.10% | 1903098 |
| chr22 | 2809682 | 5.53% | 2790335 |
| chrX | 3233352 | 2.07% | 3209917 |
| chrY | 203365 | 0.36% | 201866 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 145705091 | 1 | 1007 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Stomach_c15__mean_counts_contribs.bw | 903.13 MB | 25b2368b89cd2866e6f731fd723605fc |
| genomic_resource.yaml | 1.32 KB | 733b250f26bf1783d234ea2a3f9d886e |
| statistics/ |
