Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c15/mean_pred_corrected |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_pred_corrected for Stomach for cell cluster c15 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Stomach_c15_mean_pred_corrected | float |
liu2026Multiomics_Stomach_c15_mean_pred_corrected |
bias-corrected accessibility predicted by ChromBPNet
|
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[0.00228, 14.4] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 76129981 | 2.37% | 76129951 |
| chr1 | 7307994 | 2.94% | 7307987 |
| chr2 | 5948995 | 2.46% | 5948995 |
| chr3 | 5056623 | 2.55% | 5056622 |
| chr4 | 3544171 | 1.86% | 3544169 |
| chr5 | 3839706 | 2.12% | 3839706 |
| chr6 | 4731130 | 2.77% | 4731129 |
| chr7 | 3989910 | 2.50% | 3989908 |
| chr8 | 3385357 | 2.33% | 3385356 |
| chr9 | 3398466 | 2.46% | 3398464 |
| chr10 | 3560546 | 2.66% | 3560545 |
| chr11 | 4024537 | 2.98% | 4024535 |
| chr12 | 3696852 | 2.77% | 3696852 |
| chr13 | 1862093 | 1.63% | 1862093 |
| chr14 | 2457202 | 2.30% | 2457202 |
| chr15 | 2489252 | 2.44% | 2489251 |
| chr16 | 2613411 | 2.89% | 2613410 |
| chr17 | 3484392 | 4.19% | 3484388 |
| chr18 | 1578566 | 1.96% | 1578565 |
| chr19 | 2938925 | 5.01% | 2938923 |
| chr20 | 2002801 | 3.11% | 2002801 |
| chr21 | 987907 | 2.11% | 987906 |
| chr22 | 1457161 | 2.87% | 1457160 |
| chrX | 1670395 | 1.07% | 1670395 |
| chrY | 103589 | 0.18% | 103589 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 76129951 | 1 | 2 | 1 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Stomach_c15__mean_pred_corrected.bw | 577.17 MB | 096a3d1f4413853504d5e13c5cc94af6 |
| genomic_resource.yaml | 1.29 KB | 2ff5f716be557228d8cdbbe9663c1947 |
| statistics/ |
