Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c15/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Stomach for cell cluster c15
Description
Labels
  • assay: SHARE-seq
  • cluster: Stomach_c15
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Stomach
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Stomach_c15_obs_pval_signal float

liu2026Multiomics_Stomach_c15_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Stomach_c15_obs_pval_signal [0, 1.73e+03]
n
3,087,149,596
mean
0.487
sd
1.86

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308714959696.19% 52709575
chr1 248946438 >99.99% 4901242
chr2 242183484 >99.99% 4076376
chr3 198185480 99.94% 3494551
chr4 190204548 99.99% 2553482
chr5 181459931 99.96% 2588672
chr6 170739747 99.96% 3132411
chr7 159335795 99.99% 2687768
chr8 145076017 99.96% 2259530
chr9 138237307 99.89% 2327305
chr10 133787439 99.99% 2437697
chr11 135076179 99.99% 2789214
chr12 133264949 99.99% 2572701
chr13 114353692 99.99% 1322973
chr14 106883722 99.85% 1767243
chr15 101981149 99.99% 1607644
chr16 90225625 99.88% 1934250
chr17 83247360 99.99% 2607941
chr18 80263246 99.86% 1100423
chr19 58607600 99.98% 2244602
chr20 64333786 99.83% 1372987
chr21 46699972 99.98% 716093
chr22 50808094 99.98% 1170472
chrX 156030684 99.99% 974402
chrY 57217352 99.98% 69596
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 52709575 1 29999793 58.57 16
global segment-length histogram

Files

Filename Size md5
Stomach_c15__obs_pval_signal.bw 309.13 MB daa7f94652f83ecf29e47f2a1713e6da
genomic_resource.yaml 1.25 KB 671b3a77ebc2df609f16893319d2bcef
statistics/