Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c16/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Stomach for cell cluster c16 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Stomach_c16_mean_counts_contribs | float |
liu2026Multiomics_Stomach_c16_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
![]() |
[-0.0446, 0.112] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 91579531 | 2.85% | 90774779 |
| chr1 | 9140560 | 3.67% | 9060181 |
| chr2 | 6776046 | 2.80% | 6716188 |
| chr3 | 5580757 | 2.81% | 5530574 |
| chr4 | 3905908 | 2.05% | 3868690 |
| chr5 | 4534931 | 2.50% | 4494527 |
| chr6 | 5314422 | 3.11% | 5267122 |
| chr7 | 4741851 | 2.98% | 4700080 |
| chr8 | 3811779 | 2.63% | 3778212 |
| chr9 | 3851887 | 2.78% | 3818718 |
| chr10 | 4219197 | 3.15% | 4182291 |
| chr11 | 5053132 | 3.74% | 5008687 |
| chr12 | 4313115 | 3.24% | 4275470 |
| chr13 | 2067091 | 1.81% | 2048530 |
| chr14 | 2917228 | 2.73% | 2891511 |
| chr15 | 2906317 | 2.85% | 2880536 |
| chr16 | 3418146 | 3.78% | 3389178 |
| chr17 | 4750905 | 5.71% | 4710778 |
| chr18 | 1762883 | 2.19% | 1747214 |
| chr19 | 4646548 | 7.93% | 4609747 |
| chr20 | 2605880 | 4.04% | 2583542 |
| chr21 | 989390 | 2.12% | 979856 |
| chr22 | 2109505 | 4.15% | 2091655 |
| chrX | 2124698 | 1.36% | 2106508 |
| chrY | 37355 | 0.07% | 34984 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 90774779 | 1 | 2114 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Stomach_c16__mean_counts_contribs.bw | 561.85 MB | fef2b11ccbd7bf40749cccce012c6717 |
| genomic_resource.yaml | 1.32 KB | 55377b2a45e5855bfa372874c246d19d |
| statistics/ |
