Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c16/mean_pred_corrected |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_pred_corrected for Stomach for cell cluster c16 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Stomach_c16_mean_pred_corrected | float |
liu2026Multiomics_Stomach_c16_mean_pred_corrected |
bias-corrected accessibility predicted by ChromBPNet
|
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[0.00114, 6.32] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 47359311 | 1.48% | 47358358 |
| chr1 | 4729515 | 1.90% | 4729512 |
| chr2 | 3499178 | 1.44% | 3499177 |
| chr3 | 2881924 | 1.45% | 2881922 |
| chr4 | 2008572 | 1.06% | 2008572 |
| chr5 | 2334701 | 1.29% | 2334698 |
| chr6 | 2755195 | 1.61% | 2755195 |
| chr7 | 2437467 | 1.53% | 2437467 |
| chr8 | 1961828 | 1.35% | 1961828 |
| chr9 | 1991839 | 1.44% | 1991839 |
| chr10 | 2171915 | 1.62% | 2171914 |
| chr11 | 2615400 | 1.94% | 2615400 |
| chr12 | 2234585 | 1.68% | 2234585 |
| chr13 | 1062000 | 0.93% | 1062000 |
| chr14 | 1506154 | 1.41% | 1506154 |
| chr15 | 1499758 | 1.47% | 1499758 |
| chr16 | 1775091 | 1.96% | 1775091 |
| chr17 | 2481986 | 2.98% | 2481985 |
| chr18 | 898954 | 1.12% | 898954 |
| chr19 | 2461933 | 4.20% | 2461930 |
| chr20 | 1338089 | 2.08% | 1338089 |
| chr21 | 511926 | 1.10% | 511926 |
| chr22 | 1079512 | 2.12% | 1079511 |
| chrX | 1101910 | 0.71% | 1101910 |
| chrY | 19879 | 0.03% | 18941 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 47358358 | 1 | 911 | 1 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Stomach_c16__mean_pred_corrected.bw | 358.94 MB | 5be4953ff03bdc4650c05578bcaa16b3 |
| genomic_resource.yaml | 1.29 KB | 4b0626cfde2d692b48edd9c8ff76f530 |
| statistics/ |
