Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c16/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Stomach for cell cluster c16
Description
Labels
  • assay: SHARE-seq
  • cluster: Stomach_c16
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Stomach
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Stomach_c16_obs_pval_signal float

liu2026Multiomics_Stomach_c16_obs_pval_signal
Macs2 p-value signal track for observed accessibility
 HISTOGRAM FOR liu2026Multiomics_Stomach_c16_obs_pval_signal [0, 785]
n
3,087,167,135
mean
0.536
sd
1.04

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308716713596.19% 24344513
chr1 248946150 >99.99% 2267556
chr2 242183494 >99.99% 1835373
chr3 198179688 99.94% 1519435
chr4 190203235 99.99% 1127997
chr5 181473654 99.96% 1241185
chr6 170732373 99.96% 1387468
chr7 159335710 99.99% 1265334
chr8 145075971 99.96% 1043353
chr9 138256114 99.90% 1055192
chr10 133787427 99.99% 1107605
chr11 135076611 99.99% 1307351
chr12 133264955 99.99% 1158784
chr13 114353740 99.99% 622456
chr14 106883698 99.85% 771545
chr15 101981155 99.99% 744583
chr16 90226206 99.88% 965009
chr17 83247366 99.99% 1185361
chr18 80263246 99.86% 487958
chr19 58607593 99.98% 1162601
chr20 64332809 99.83% 670021
chr21 46699965 99.98% 283916
chr22 50808344 99.98% 568387
chrX 156030774 99.99% 550393
chrY 57216857 99.98% 15650
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 24344513 1 30008325 126.81 34
global segment-length histogram

Files

Filename Size md5
Stomach_c16__obs_pval_signal.bw 139.34 MB cf6e90811e03e890eac56e967c7542be
genomic_resource.yaml 1.25 KB 1f73488c617d45d8ebb028b13e7cd615
statistics/