Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c17/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Stomach for cell cluster c17 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Stomach_c17_mean_counts_contribs | float |
liu2026Multiomics_Stomach_c17_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0266, 0.064] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 73477671 | 2.29% | 72776967 |
| chr1 | 7399841 | 2.97% | 7329135 |
| chr2 | 5807480 | 2.40% | 5751834 |
| chr3 | 4738279 | 2.39% | 4692568 |
| chr4 | 3233566 | 1.70% | 3200648 |
| chr5 | 3567108 | 1.96% | 3532686 |
| chr6 | 4238433 | 2.48% | 4198058 |
| chr7 | 3512243 | 2.20% | 3478426 |
| chr8 | 2923149 | 2.01% | 2894907 |
| chr9 | 3265717 | 2.36% | 3234765 |
| chr10 | 3562273 | 2.66% | 3528630 |
| chr11 | 4029492 | 2.98% | 3991873 |
| chr12 | 3785831 | 2.84% | 3749797 |
| chr13 | 1633310 | 1.43% | 1617551 |
| chr14 | 2353722 | 2.20% | 2331489 |
| chr15 | 2314915 | 2.27% | 2292983 |
| chr16 | 2726289 | 3.02% | 2700940 |
| chr17 | 3669505 | 4.41% | 3634881 |
| chr18 | 1311789 | 1.63% | 1298303 |
| chr19 | 3445798 | 5.88% | 3414930 |
| chr20 | 1849841 | 2.87% | 1832375 |
| chr21 | 820583 | 1.76% | 812557 |
| chr22 | 1500992 | 2.95% | 1486916 |
| chrX | 1751914 | 1.12% | 1735452 |
| chrY | 35601 | 0.06% | 35263 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 72776967 | 1 | 954 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Stomach_c17__mean_counts_contribs.bw | 451.32 MB | 30811bca93753f92d5d389f82188122c |
| genomic_resource.yaml | 1.32 KB | 4673f718d89e48b524fbdf389ffe14e4 |
| statistics/ |
