Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c17/mean_pred_corrected |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_pred_corrected for Stomach for cell cluster c17 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Stomach_c17_mean_pred_corrected | float |
liu2026Multiomics_Stomach_c17_mean_pred_corrected |
bias-corrected accessibility predicted by ChromBPNet
|
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[0.000334, 2.09] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 37188036 | 1.16% | 37188027 |
| chr1 | 3755298 | 1.51% | 3755297 |
| chr2 | 2938608 | 1.21% | 2938607 |
| chr3 | 2393690 | 1.21% | 2393689 |
| chr4 | 1628512 | 0.86% | 1628510 |
| chr5 | 1799381 | 0.99% | 1799381 |
| chr6 | 2156672 | 1.26% | 2156672 |
| chr7 | 1766989 | 1.11% | 1766989 |
| chr8 | 1466297 | 1.01% | 1466297 |
| chr9 | 1649521 | 1.19% | 1649521 |
| chr10 | 1810660 | 1.35% | 1810660 |
| chr11 | 2051688 | 1.52% | 2051687 |
| chr12 | 1917515 | 1.44% | 1917514 |
| chr13 | 823972 | 0.72% | 823972 |
| chr14 | 1196631 | 1.12% | 1196631 |
| chr15 | 1165579 | 1.14% | 1165579 |
| chr16 | 1374441 | 1.52% | 1374441 |
| chr17 | 1861564 | 2.24% | 1861564 |
| chr18 | 656007 | 0.82% | 656007 |
| chr19 | 1780545 | 3.04% | 1780545 |
| chr20 | 926429 | 1.44% | 926429 |
| chr21 | 409775 | 0.88% | 409775 |
| chr22 | 752356 | 1.48% | 752355 |
| chrX | 888129 | 0.57% | 888128 |
| chrY | 17777 | 0.03% | 17777 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 37188027 | 1 | 2 | 1 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Stomach_c17__mean_pred_corrected.bw | 281.9 MB | 8e46354995a179be21c15f82868d13a2 |
| genomic_resource.yaml | 1.29 KB | 8ad3c9c17dbc162e4d89c3b0f4eb7a44 |
| statistics/ |
