Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c17/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Stomach for cell cluster c17
Description
Labels
  • assay: SHARE-seq
  • cluster: Stomach_c17
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Stomach
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Stomach_c17_obs_pval_signal float

liu2026Multiomics_Stomach_c17_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Stomach_c17_obs_pval_signal [0, 458]
n
3,086,751,637
mean
0.752
sd
0.633

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308675163796.18% 11061416
chr1 248946302 >99.99% 1025093
chr2 242147749 99.98% 859204
chr3 198183243 99.94% 706415
chr4 190182259 99.98% 541784
chr5 181475201 99.97% 543302
chr6 170736583 99.96% 621826
chr7 159335901 99.99% 544252
chr8 145075607 99.96% 439994
chr9 138237192 99.89% 499932
chr10 133787427 99.99% 550252
chr11 135076001 99.99% 602041
chr12 133264843 99.99% 549178
chr13 114353542 99.99% 273024
chr14 106882598 99.85% 372757
chr15 101981162 99.99% 327776
chr16 90215594 99.86% 420402
chr17 83247265 99.99% 551844
chr18 80263246 99.86% 228248
chr19 58607376 99.98% 508589
chr20 64327861 99.82% 283431
chr21 46699961 99.98% 136475
chr22 50807973 99.98% 245461
chrX 156030666 99.99% 216914
chrY 56886085 99.40% 13222
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 11061416 1 30001440 279.06 74
global segment-length histogram

Files

Filename Size md5
Stomach_c17__obs_pval_signal.bw 61.51 MB 6311d9edc3a713898d1870ac7b9b19aa
genomic_resource.yaml 1.25 KB d1f2a95930df519671a930738d9c416b
statistics/