Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Stomach/c18/mean_pred_corrected |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_pred_corrected for Stomach for cell cluster c18 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Stomach_c18_mean_pred_corrected | float |
liu2026Multiomics_Stomach_c18_mean_pred_corrected |
bias-corrected accessibility predicted by ChromBPNet
|
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[0.00117, 8.77] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 54664814 | 1.70% | 54664804 |
| chr1 | 5472242 | 2.20% | 5472241 |
| chr2 | 4359596 | 1.80% | 4359595 |
| chr3 | 3433000 | 1.73% | 3432999 |
| chr4 | 2442146 | 1.28% | 2442146 |
| chr5 | 2659073 | 1.46% | 2659073 |
| chr6 | 3177089 | 1.86% | 3177089 |
| chr7 | 2691140 | 1.69% | 2691140 |
| chr8 | 2313954 | 1.59% | 2313954 |
| chr9 | 2411276 | 1.74% | 2411275 |
| chr10 | 2576974 | 1.93% | 2576973 |
| chr11 | 3064846 | 2.27% | 3064845 |
| chr12 | 2626612 | 1.97% | 2626612 |
| chr13 | 1191456 | 1.04% | 1191456 |
| chr14 | 1785958 | 1.67% | 1785958 |
| chr15 | 1775776 | 1.74% | 1775775 |
| chr16 | 1951447 | 2.16% | 1951447 |
| chr17 | 2724229 | 3.27% | 2724228 |
| chr18 | 1041740 | 1.30% | 1041739 |
| chr19 | 2427400 | 4.14% | 2427400 |
| chr20 | 1446714 | 2.24% | 1446714 |
| chr21 | 606655 | 1.30% | 606655 |
| chr22 | 1225115 | 2.41% | 1225115 |
| chrX | 1228742 | 0.79% | 1228741 |
| chrY | 31634 | 0.06% | 31634 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 54664804 | 1 | 2 | 1 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Stomach_c18__mean_pred_corrected.bw | 414.45 MB | 1bfe913a3f072f16e6bdeba39dcad5a9 |
| genomic_resource.yaml | 1.29 KB | 10e1c5db1c1233adcbf0a9b84de7747d |
| statistics/ |
